Description
Indu Book Services Pvt Ltd Easy Way of Doing Bioinformatics A Tools for Biological Data Analysis in 2 Vols by Tiratha Raj Singh
Contents Acknowledgement v Preface vii VOLUME - 1 Section - 1 Bioinformatics Basics and Biological Databases 1. Bioinformatics: A Primer 3 2. Biological Databases and Their Management 11 3. Biological Sequence File Formats 33 4. Bioinformatic Tools 73 5. ENTREZ: A Powerful and Efficient Search Engine 108 6. National Center for Biotechnology Information (NCBI) 116 7. GenBank/GenPept 127 8. The EMBL Nucleotide Sequence Database 140 9. DNA Databank of Japan (DDBJ) 153 Section - 2 Sequence Alignment 10. Pairwise Sequence Alignment 163 11. “Dot Plot”: Graphical Method of Sequence Alignment 181 12. Dynamic Programming 194 13. Scoring Matrices 205 14. Basic Local Alignment Search Tool (BLAST) 214 15. Multiple Sequence Alignment 228 16. Primer Designing 246 17. Searching Motifs 256 18. Restriction Site Detection 264 19. Conserved Domain Search 271 VOLUME - 2 Section - 3 Phylogenetic Analysis and Allele Mining 20. Phylogenetic Tree Construction Methods and Programs 279 21. Allele Mining 309 Section - 4 Protein and Protein Structure Prediction 22. Resources for Protein Sequences 321 23. Protein Structure – An Introduction 331 24. Protein Structure Prediction 344 25. Protein Structure Visualization and Analysis 371 26. Protein Structure Databases 400 Section - 5 Predictive Methods and Drug Designing 27. Predictive Methods Using Protein Sequences 423 28. Homology Modeling 440 29. Computer Aided Drug Designing 455